{"id":33,"date":"2017-01-05T20:00:27","date_gmt":"2017-01-05T20:00:27","guid":{"rendered":"http:\/\/wordpress.uchospitals.edu\/basu-lab\/?page_id=33"},"modified":"2017-03-23T00:48:52","modified_gmt":"2017-03-23T00:48:52","slug":"high-throughput-in-vivo-drug-screening","status":"publish","type":"page","link":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/high-throughput-in-vivo-drug-screening\/","title":{"rendered":"High throughput Drug Screening in vivo"},"content":{"rendered":"<div id=\"content-panels\" class=\"at-panel gpanel panel-display content clearfix\">\n<div class=\"region region-content-top\">\n<div class=\"region-inner clearfix\">\n<div id=\"block-os-pages-main-content\" class=\"block block-os-pages no-title\">\n<div class=\"block-inner clearfix\">\n<div class=\"block-content content\">\n<article id=\"node-315991\" class=\"node node-page article clearfix\">\n<div class=\"node-content\">\n<div class=\"field field-name-body field-type-text-with-summary field-label-hidden view-mode-full\">\n<div class=\"field-items\">\n<div class=\"field-item even\">\n<div>\n<p>High-throughput drug screening conducted using various technologies, such as robotic handling and micro-titer plates, have significantly advanced drug development. However, the costs and time associated with such technologies are exorbitant. Droplet microfluidics provides a popular <em>lab-on-a-chip<\/em> technique where reagents may be combined in pico-liter volumes in a fast and controlled manner. We use such devices to generate water-in-oil emulsion droplets at high throughput (~5k-10k drops per second) that efficiently encapsulate cells in presence of drugs. Reducing the size of the reaction compartments to pico-liter volumes allow us to be parsimonious with reagents while the large number of droplets (~10<sup>5<\/sup>-10<sup>6<\/sup>) provides superior statistical resolution.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"size-medium wp-image-187 alignleft\" src=\"http:\/\/medpress.bsd.uchicago.edu\/basu-lab\/files\/2017\/03\/drops_dye_conc-300x233.png\" alt=\"\" width=\"300\" height=\"233\" srcset=\"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/files\/2017\/03\/drops_dye_conc-300x233.png 300w, https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/files\/2017\/03\/drops_dye_conc-768x597.png 768w, https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/files\/2017\/03\/drops_dye_conc.png 842w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/p>\n<p>In this project, we use two sets of microfluidic devices to test the efficacy of cancer chemotherapy drugs on human cell lines where the drug concentrations are systematically varied.  A fluorescent dye indicates the chemotherapy drug concentration (see figure to the left; drug concentration is proportional to the fluorescent intensity of the drop). The efficacy of the drugs is measured as functions of exposure time and drug concentration from the cell-fate of human lymphoblast cells (LCL) in each drop after co-incubation, using fluorescent live\/dead cell-fate reporter kit.<\/p>\n<p>After the drops are generated, we collect the drops off chip, incubate them for different time intervals, and then re-inject the drops into a second microfluidic chip where they are excited by a laser beam and the resulting fluorescent emission from the drug and cells (dead\/alive) are simultaneously detected using photo-multiplier tubes (PMT). The PMT voltage, indicative of fluorescent intensity, reports drug concentration, while the duration of the signal distinguishes a drug-laden drop from a live cell (bottom, left). Overall statistical information is aggregated onto a heat-map shown on bottom, right.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"media-element file-default file-os-files-medium\" title=\"\" src=\"http:\/\/static.scholar.harvard.edu\/files\/styles\/os_files_medium\/public\/abasu\/files\/drug_test_trace.png?m=1455502075&amp;itok=Qa_V9jCr\" alt=\"\" width=\"324\" height=\"206\" \/><\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"media-element file-default file-os-files-medium alignleft\" title=\"\" src=\"http:\/\/static.scholar.harvard.edu\/files\/styles\/os_files_medium\/public\/abasu\/files\/heatmap-drugtest.png?m=1455501964&amp;itok=R50Ef0Gf\" alt=\"\" width=\"225\" height=\"203\" \/><\/p>\n<\/div>\n<p><span class=\"ng-binding\"> <\/span><\/p>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/article>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>High-throughput drug screening conducted using various technologies, such as robotic handling and micro-titer plates, have significantly advanced drug development. However, the costs and time associated with such technologies are exorbitant. Droplet microfluidics provides a popular lab-on-a-chip technique where reagents may be combined in pico-liter volumes in a fast and controlled manner. We use such devices &hellip; <\/p>\n<p class=\"link-more\"><a href=\"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/high-throughput-in-vivo-drug-screening\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;High throughput Drug Screening in vivo&#8221;<\/span><\/a><\/p>\n","protected":false},"author":233,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-33","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/pages\/33","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/users\/233"}],"replies":[{"embeddable":true,"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/comments?post=33"}],"version-history":[{"count":8,"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/pages\/33\/revisions"}],"predecessor-version":[{"id":320,"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/pages\/33\/revisions\/320"}],"wp:attachment":[{"href":"https:\/\/medpress.bsd.uchicago.edu\/basu-lab\/wp-json\/wp\/v2\/media?parent=33"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}